CDS
| Accession Number | TCMCG015C32017 |
| gbkey | CDS |
| Protein Id | XP_027064350.1 |
| Location | join(32272480..32278156,32278234..32278244) |
| Gene | LOC113690578 |
| GeneID | 113690578 |
| Organism | Coffea arabica |
Protein
| Length | 1895aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA506972 |
| db_source | XM_027208549.1 |
| Definition | DExH-box ATP-dependent RNA helicase DExH12-like isoform X2 [Coffea arabica] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | U5 small nuclear ribonucleoprotein 200 kDa |
| KEGG_TC | - |
| KEGG_Module |
M00354
[VIEW IN KEGG] M00355 [VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12854
[VIEW IN KEGG] |
| EC |
3.6.4.13
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005911 [VIEW IN EMBL-EBI] GO:0009506 [VIEW IN EMBL-EBI] GO:0030054 [VIEW IN EMBL-EBI] GO:0055044 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGTCAGATTCCGGTGGTGGAGCGGAGGCTCGCGCCCGTTCCAAACAGTATGAGTATGGAGCCAACTCCAGTCTTATCCTCACTTCCGAGTCTCGCCACCCTCGTGACGCCCAGGAGCCCTCCGGCGAGCCCGAGTCCCTTCGAGGCAAAATAGATCCCAGAACCTTTGGTGATCGTGTCTTCCGGGATGAAGAGTCGAAGAAGAAGGAGCGAGAATCGCTAGCTTCTGAAGCGAATTCCGGGAGGGAGAGTAAGAAGAGGAGGATTGTTCACGAGGAAAGTGTTTTTACTTTGATTGACGAGGGTGTTTATCAACCTAAAAGTAGAGAAACCAGGGCGGCCTATGAGGCCATGCTCAGTTTTATTCAGCAACAGTTAGGTGGGCAGCCTGTTAATGTTGTTAGGGGCGCTGCAGATGAGATTTTAGCTGTTCTTAAGAATGATAATCTCAAGAACCATGATAAGAAGAAGGAGATGGAGAAGTTCTTGAGTAATCCTATCCCCAACCAAGTGTTTGATCATGTCGTGTCTATCGGGCGGCTCATTACTGATTACCGAGATGCTGCTGCGGGAGGGGATGATGGTCTTGATGATGATGATGTTGGAGTTGCGGTTGAATTTGAGGAGAATGAAGAAGTGGATAATGGATGTGTGTATGATTTGGTGCAGGAGGATGAAGAGGAGGAAGATGATGGAGTCTACGTGAATAATTGCACCAATGGTGCTGGTGCAATGTGGATGGGTCGTGGGATTGATGATGATGATGACGAGATGCAGGATGCTAGGGATGAGGAGATGGCCTTGAATGTTAGGGACATTGATGCCTATTGGCTTCAGAGGAAGATTTCAGAGGCTTATGGGGACCAGATTGATGCCCAGCAGAGCCAGAAGCTTGCTGAGGAGATCCTCGAGATTCTTACTGAAGGTAATGACTGTGATGTTGAACTTAAACTTTTGTTGCATATGCAGTTTGATAAGTTCAGTCTCGTCAAGTTTATGTTGCAGAACCGGCTGAAGATAGTTTGGTGCACTCGTTTGGCAAGGGCTGAAGGCAAAGAGGATAGGAAGAAAATTGAGGTGGAGATGGTAGCGCAGGGGCCAGATCATGCTGCAATTCTGGAACAGTTGCACAGCATCCGGTCCAGGGCTACTGCAAAAGAGAGGCAGAAGAACCTGAAGAAGAGCATTAGAGATGAAGCACTCCGATTGAAGGATAAGAAAGGACGAGGAGATGGGCAACGTGAAAGAATGGTGTTAGCCGATAGAGAAGCTGATGGTGGTTGGCTGTCAGGGGAACGTCAGTTAATTGATCTTGACAGCCTTGCTTTCCACCAGGGAGGTCTTTTTATGGCAAATAAGAGGTGTGAGCTTCCAGGAGGTTCTTTCAGGAATCAAAAGAAGGGATATGAAGAAATTCATGTACCAGCCTTGAAGCCGAAGCCATTAGCACCTGGTGAAGAACTAATAAAGATCTCTTCCATGCCTGCCTGGGCGCAGCCGGCTTTCAAAGGAATGGCGCAGTTAAACAGGGTTCAAAGTAAAGTTTATGAAACTGCCCTTTTTAGTGCAGATAATATTCTTTTATGTGCTCCCACTGGTGCAGGGAAGACCAATGTTGCTATGCTCACCATCCTTCAGCAGATTGCTTTGAATAGAAATCAAGATGGTTCTTTTAACCACAGCAATTACAAAATTGTCTATGTTGCTCCAATGAAGGCATTAGTTGCTGAAGTGGTCGGTAACCTCTCCAATCGTCTCCAGGATTATGATGTCAAGGTGAAAGAGCTGAGCGGAGACCAGACACTGACGCGTCAACAGATTGAAGAGACTCAGATCATTGTTACAACACCCGAGAAGTGGGATATAATAACCAGGAAATCAGGTGACCGCACCTACACCCAGCTTGTGAAACTGCTAATCATTGATGAGATACATCTGTTGCATGATAACCGAGGTCCTGTACTGGAGAGTATTGTTGCAAGAAGTGTTAGACAGATTGAGACCACCAAAGAGCACATAAGGTTGGTGGGCTTGTCAGCAACACTTCCAAACTATGAAGATATAGCTTTGTTCTTGCGCGTTGATGCTAAGAAAGGTCTCTTTCACTTTGACAATAGCTATAGACCCGTTTCTCTTGCGCAAGAGTATGTAGGAATCTCCGTAAAGAAGCCGCTGCAGAGATTTCAGTTGATGAATGATGTGTGCTATGAGAAAGTAATCAATGTTGCAGGAAAGCATCAGGTGCTTATTTTCGTGCACTCCAGGAAAGACACTGCCAGGACAGCTCGTGCAATACGTGATGCTGCACTTGCTAATGATACTCTTGCTAAATTCTTAAAAGAGGACAGTGCAAGCCGTGAAATTCTTCAGAGTCACACGGAGCTTGTCAAGAGCAATGATCTCAAGGACTTACTACCTTATGGTTTTGCAATTCATCATGCTGGTATGGTCAGAGCTGATCGTCAAATTGTCGAGGATCTTTTTTCTGGTGGGCATGCACAAGTGTTGGTTTCCACGGCTACTCTAGCGTGGGGTGTCAATTTACCAGCTCATACTGTGATTATCAAAGGTACCGAGATATACAATCCTGAAAAGGGAGCGTGGACTGAACTAAGCCCCCTTGATGTTATGCAGATGCTTGGCCGTGCCGGAAGGCCTCAATTTGACACTTTTGGGGAAGGAATTATTATAACCCGACATAGCGAGCTACAGTATTATCTGTCTTTGATGAATCAGCAGCTTCCCATTGAAAGCCAGTTTCTGTCGAAGTTAGCTGATCAGTTGAATGCAGAAATTGTCCTTGGAAGCGTTCAGAATGCTAAAGAAGCTTGCACTTGGCTCGCTTATACTTATCTTAATCTTCGCATGCTTCGGAATCCTAGCCTTTATGGTTTAGCTGCTGATGATGCCCTTGCTGTTGATAATATGTTGGAAGAAAGGAGAGCTGATCTGGTACATTCAGCCGCAACACTATTGCACAAGAATAACCTAGTGAAATATGACAGGAAAAGTGGATATTTCCAGGTCACTGACTTGGGACGCATTGCCAGCAATTACTACATAACTCATGGAACAATTTCTACATACAATGAGCACTTGAAGCCAACTATGGGGGACATTGAGCTTTGTCGTCTGTTTGGCCTTAGTGAAGAATTTAGGTATGTGACAGTGAGACAAGATGAGAAGGTTGAATTGGGAAAGCTTCTGGACCGTGTCCCTATTCCTATCAAAGAGAGTATTGAGGAGCCTAGTGCCAAGATTAATGTTCTTCTTCAGGCATACATTTCGCAACTGAAGCTTGAAGGTCTCTCTTTGGCATCTGAAATGGTGTTTATTACCCAGAGTGCTGGGCGTCTTATGAGAGCATTGTTTGAGATTGTTCTAAAGAGAGGATGGGCCAAATTAACAGAGAAGGCATTGAAGTGGTGCAAAATGATTGACAAGAGAATGTGGAGTGTCCAGACACCACTCCGTCAATTTCATGGGATTCCAAATGAAATTTTGATGAAGTTGGAGAAGAAAGATCTGGCTTGGGAAAGATACTACGACCTCTCCTCACAGGAGATAGGAGAACTCATCCGTTTTCCTAAGATGGGGAGAACTCTCCACAAGTTGATTCATCAATTCCCAAAGCTTAACTTGGCGGCTCATGTCCAACCAATCACTCACTCAGTTTTGAAGGTTGAGCTCACCATTACACCTGATTTCCAATGGGACGACAAAGTACATGGATTTGTGGAACCATTTTGGGTAATTGTGGAGGATAATGACGGGGAAAATATTCTCCATCATGAATATTTCTTGCTAAAGAAACAACATATCGATGAGGATCATACTTTGGATTTCACAGTCTCAACGCATGAACCACTGCCTCCCCAGTACTTCATTCGCGTTGTGTCAGATCGATGGCTTGGGTCACAGACTGTCTTACCTGTTTCTTTCCGGCACCTGATTCTGCCAGATAAATATCCTCCTCCCACAGAGTTATTAGACTTGCAACCCTTGCCTGTGAGAGCTCTAAGAAATCCATCTTATGAAGCTCTATATCAAGAGTTTGAGCACTTTAATCCTGTCCAAACTCAGGTTTTCACTATCCTGTACCACTCGGATGACAATGTCTTAGTAGCTGCACCCACTGGTAGTGGAAAGACAATATGTGCAGAATTTGCCATATTGAGAAATCACCAAAAAGGTTCTGAAAGTATCCTGCGTGCTGTGTACATTGCTCCTATTGAGGCTCTTGCTAAGGAGCGGTATAATGACTGGAAAAGGAAGTTTGGAGATGGGCTAGGGATGAAAGTGGTTGAATTAACTGGTGAGATAGCGACAGATATCAAACTGCTTGAAAGAGGTCATATAATTATTAGCACTCCAGAGAAATGGGATGCTGTATCTCGCCGTTGGAAACAGAGGAAGCATGTTCAGCAAGTTAGTCTTTTCATTGTTGATGAACTCCATCTGATTGGGGGCCGGGGTGGGCCTATTTTGGAGGTTATAGTTTCTAGAATGAGATATATTGCAAGTCAGCTTGAGAACAAGATCAGGATTGTAGCTTTATCAACTTCTCTTGCTAATGCCAAAGATTTGGGAGAATGGATTGGAGCGAACTCTCATGGTCTTTTCAACTTTCCTCCCGGTGTGCGACCTGTACCCTTGGACATACATGTTCAGGGCATTGATGCTGCTAATTTTGAAGCCAGGATGCAGGCCATGACAAAACTCACTTATACTGCTATTGTCAAACACGCCAAGAAAGGGAAACCTGCAATTGTGTTTGTTCCTGCCAGGAAGCATGCCCGCTTGACTGCTGTGGATCTGATGACTTATGCAAGTGTGGACCCCGACAAAATAATGTTCCTTTTACAGTCTGCAGGAGATTTGGAACCTTTCATTGATAGAATTAAAGAACCTACATTGAAAGAGACGCTTCGGTATGGTGTGGGTTATTTGCAGGAGGGCTTAACTGGTACTGATCAAGATATAGTCAAGACTCTGTTTGAAACTGGAGGGATTCAAGTGTGTGTTATGAGTAGTTCAATGTCTTGGGGAGTGGCCTTGTCTGCACATCTAGTGGTGATTATGGGCACTCGACATTATGATGGCAGAGAAAATGCTCATAGAGACTACCCTGTTACTGATTTGCTGCAGATGATGGGTCATGCCAACCGACCTCTTGTTGATAACTTGGGGAAATGTGTAATCTTCTGTCATGCGCCACGTAAGGAGTACTACAAGAAGTTCTTATACGAAGCATTCCCAGTTGAAAGCCATTTGCATCATTATCTGCATGACAATTTGAATGCTGAGGTGGTTGTCAAGGCCATACAAAACAAGCAGGACGCTGTGGATTATCTAACATGGACATTCATGTATAGGAGGCTCACCCAGAATCCAAACTACTATAATTTGCAGGGTGTTAATCACAGACATTTATCTGATCACCTGTCAGAGCTTGTTGAAAACACAATAAGTGATCTTGAAGCAAGTAAATGTGTTCTTGTTGAAGATGATTTCTTACTTTCACCTTTAAATCTTGGCAGGATAGCATCGTACTACTATGTGAGTTACAGCACAATTGAACGTTTTAGTTCTTCTTTGAACTCCAAAACCAAATTGAAGGGTTTACTGGATATCTTGGCTTCAGCTTCAGAGTATGAACAACTTCCAGTTAGACCAGGTCAAAGCTGA |
| Protein: MSDSGGGAEARARSKQYEYGANSSLILTSESRHPRDAQEPSGEPESLRGKIDPRTFGDRVFRDEESKKKERESLASEANSGRESKKRRIVHEESVFTLIDEGVYQPKSRETRAAYEAMLSFIQQQLGGQPVNVVRGAADEILAVLKNDNLKNHDKKKEMEKFLSNPIPNQVFDHVVSIGRLITDYRDAAAGGDDGLDDDDVGVAVEFEENEEVDNGCVYDLVQEDEEEEDDGVYVNNCTNGAGAMWMGRGIDDDDDEMQDARDEEMALNVRDIDAYWLQRKISEAYGDQIDAQQSQKLAEEILEILTEGNDCDVELKLLLHMQFDKFSLVKFMLQNRLKIVWCTRLARAEGKEDRKKIEVEMVAQGPDHAAILEQLHSIRSRATAKERQKNLKKSIRDEALRLKDKKGRGDGQRERMVLADREADGGWLSGERQLIDLDSLAFHQGGLFMANKRCELPGGSFRNQKKGYEEIHVPALKPKPLAPGEELIKISSMPAWAQPAFKGMAQLNRVQSKVYETALFSADNILLCAPTGAGKTNVAMLTILQQIALNRNQDGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQDYDVKVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARSVRQIETTKEHIRLVGLSATLPNYEDIALFLRVDAKKGLFHFDNSYRPVSLAQEYVGISVKKPLQRFQLMNDVCYEKVINVAGKHQVLIFVHSRKDTARTARAIRDAALANDTLAKFLKEDSASREILQSHTELVKSNDLKDLLPYGFAIHHAGMVRADRQIVEDLFSGGHAQVLVSTATLAWGVNLPAHTVIIKGTEIYNPEKGAWTELSPLDVMQMLGRAGRPQFDTFGEGIIITRHSELQYYLSLMNQQLPIESQFLSKLADQLNAEIVLGSVQNAKEACTWLAYTYLNLRMLRNPSLYGLAADDALAVDNMLEERRADLVHSAATLLHKNNLVKYDRKSGYFQVTDLGRIASNYYITHGTISTYNEHLKPTMGDIELCRLFGLSEEFRYVTVRQDEKVELGKLLDRVPIPIKESIEEPSAKINVLLQAYISQLKLEGLSLASEMVFITQSAGRLMRALFEIVLKRGWAKLTEKALKWCKMIDKRMWSVQTPLRQFHGIPNEILMKLEKKDLAWERYYDLSSQEIGELIRFPKMGRTLHKLIHQFPKLNLAAHVQPITHSVLKVELTITPDFQWDDKVHGFVEPFWVIVEDNDGENILHHEYFLLKKQHIDEDHTLDFTVSTHEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPDKYPPPTELLDLQPLPVRALRNPSYEALYQEFEHFNPVQTQVFTILYHSDDNVLVAAPTGSGKTICAEFAILRNHQKGSESILRAVYIAPIEALAKERYNDWKRKFGDGLGMKVVELTGEIATDIKLLERGHIIISTPEKWDAVSRRWKQRKHVQQVSLFIVDELHLIGGRGGPILEVIVSRMRYIASQLENKIRIVALSTSLANAKDLGEWIGANSHGLFNFPPGVRPVPLDIHVQGIDAANFEARMQAMTKLTYTAIVKHAKKGKPAIVFVPARKHARLTAVDLMTYASVDPDKIMFLLQSAGDLEPFIDRIKEPTLKETLRYGVGYLQEGLTGTDQDIVKTLFETGGIQVCVMSSSMSWGVALSAHLVVIMGTRHYDGRENAHRDYPVTDLLQMMGHANRPLVDNLGKCVIFCHAPRKEYYKKFLYEAFPVESHLHHYLHDNLNAEVVVKAIQNKQDAVDYLTWTFMYRRLTQNPNYYNLQGVNHRHLSDHLSELVENTISDLEASKCVLVEDDFLLSPLNLGRIASYYYVSYSTIERFSSSLNSKTKLKGLLDILASASEYEQLPVRPGQS |